RNAseq data from Interleukin-21 contributes to fatal inflammatory disease in the absence of FoxP3+ T regulatory cells
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View SamplesA project to identify genes and transcripts regulated by infection in Drosophila melanogaster.
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Sex, Specimen part, Cell line, Treatment
View SamplesChanges in gene expression during adaptation to abiotic stress conditions in the barley roots.
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Age, Specimen part, Time
View SamplesThis study presented the differentially expressed genes post maize infected by Rhizoctonia solani.
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Specimen part
View SamplesTransposons in maize may be involved in the formation of circRNAs and further modulate phenotypic variation. To test our hypothesis, we performed circRNA-Seq(RNase R treated) on B73 seedlings(third leaves of V3 stage), and uncovered 1,572 high-confidence maize circRNAs, which show distinct genomic features compared to linear transcripts. Comprehensive analyses showed that LINE1-like elements (LLE) and their reverse complementary pairs (RCPLLEs) are significantly enriched in the flanking regions of circRNAs.
Circular RNAs mediated by transposons are associated with transcriptomic and phenotypic variation in maize.
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Specimen part, Disease
View SamplesThe research of maize freezing tolerance.
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Specimen part
View SamplesGenes encoding the circadian pacemaker in the hypothalamic suprachiasmatic nuclei (SCN) of mammals have recently been identified, but the molecubasis of circadian timing in peripheral tissue is not well understood. We used a bead-based microarray to identify mouse liver transcripts that show circadian cycles of abundance under constant conditions.
Comprehensive analysis of microRNA-mRNA co-expression in circadian rhythm.
Sex, Age, Specimen part
View SamplesA novel transcriptional cascade involved in Fzr-mediated endoreplication
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Sex, Specimen part, Cell line
View SamplesThere is limited knowledge on the biological function of group C MAPK. To reveal the function of MnMAPK6, a group C MAPK, in the transgenic Arabidopsis, a transcriptome analysis was performed by Illumina sequencing for the assessment of gene expression changes between WT and MnMPK6-overexpressed Arabidopsis.
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Specimen part, Treatment
View SamplesWe measured mRNA abundance in the embryogenic tissue of 150 recombinant Steptoe x Morex doubled-haploid lines (no replicates) and in parental genotypes, Steptoe and Morex, 3 replicates each, total 156 chips.
SFP genotyping from affymetrix arrays is robust but largely detects cis-acting expression regulators.
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Age, Specimen part, Time
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