Soybean transcript fluctuations were observed in response to Rhizoctonia solani AG-1 IA causing Rhizoctonia foliar blight. The overall goal was to observe the general transcriptome fluctuations using RNAseq Illumina HiSeq analysis.
No associated publication
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Specimen part, Disease
View SamplesComparing the gene expression patterns between wild type plant (Col-0) and MYB Over-expression plants.
Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis.
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No sample metadata fields
View SamplesSingle mutant msh1
Extensive rearrangement of the Arabidopsis mitochondrial genome elicits cellular conditions for thermotolerance.
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No sample metadata fields
View SamplesDouble mutant msh1 and recA3
Extensive rearrangement of the Arabidopsis mitochondrial genome elicits cellular conditions for thermotolerance.
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No sample metadata fields
View SamplesIn order to find out the Pc target genes responsible for sleep in stx mutant, we performed RNA seq analysis in adult fly head tissues of yw control vs. stxd77 flies
No associated publication
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Age, Specimen part
View SamplesTo reveal the toxic mechanism of thifluzamide in zebrafish
No associated publication
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No sample metadata fields
View SamplesThe study was to unravel the complex toxic effects of chemical contaminants on the health of organisms as based on different levels of biological profling.
No associated publication
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Sex, Specimen part, Cell line
View SamplesIn depth temporal profiling of transcript changes at 10 time points during germination in Arabidopsis seed was carried out. The time course utilised, encompassed seed maturation, stratification, germination and post-germination and provided a global investigation into the tightly regulated, phasic changes that define seed germination.
In-depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis.
Specimen part, Disease, Time
View SamplesTranscriptomic analysis of gene expression during the differentiation of cell suspension cultures into tracheary elements using the biological system published by Pesquet et al., Current Biology (2010): tracheary element differentiation was triggered by externally supplying hormone-free habituated cell suspension cultures of Arabidopsis thaliana Col-0 with auxin, cytokinin and epibrassinolides; RNA samples extracted from 3 independent time-courses every 12h from 0h to 4 days were analyzed using ATH1 Arabidopsis Affymetrix micro-array
Proteomic Analysis of Microtubule Interacting Proteins over the Course of Xylem Tracheary Element Formation in Arabidopsis.
Specimen part, Time
View SamplesThe translocase of the inner membrane 17-1 (Tim17-1) plays a defined role in germination in Arabidopsis thaliana
The mitochondrial protein import component, TRANSLOCASE OF THE INNER MEMBRANE17-1, plays a role in defining the timing of germination in Arabidopsis.
Specimen part, Time
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