Transcriptional profiling of C. elegans on pathogenic Pseudomonas aeruginosa

RNA-seq of Wild Type (N2), pmk-1 or atf-7 mutant animals exposed to either non-pathogenic E. coli OP50 or pathogenic P. aeruginosa PA14 Overall design: mRNA profiles were generated using 3 replicates (>1,000 animals each) of each condition were prepared and sequenced, except for atf-7(qd22qd130) on PA14 which had only 2 replicates. Sequenced on Illumina NextSeq 500

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Fletcher M, Tillman EJ, Butty VL, Levine SS, Kim DH