The dynamic landscape of coding and non-coding RNAs in the innate immune response to microbial pathogens

SRP128903

Homo sapiens

9 Downloadable Samples

Illumina HiSeq 2000

Submitter Supplied Information

Description

We performed a systematic analysis of the coding and non-coding transcriptomes of human macrophages after stimulation with ligands to TLR2/6 (FSL), TLR 1/2 (Pam3CSK4), and TLR4 (LPS) Overall design: Transcriptome of THP1 derived macrophages without and with treatment with 3 different TLR ligands for 8hrs

PubMed ID

30918008

Publication Title

The long noncoding RNA <i>ROCKI</i> regulates inflammatory gene expression.

Total Samples

Submitter’s Institution

No associated institution

Authors

Zhang Q, Chao TC, Patil VS, Qin Y, Tiwari SK, Chiou J, Dobin A, Tsai CM, Li Z, Dang J, Gupta S, Urdahl K, Nizet V, Gingeras TR, Gaulton KJ, Rana TM

Source Repository

Sequence Read Archive (SRA)

Alternate Accession IDs

GSE109084

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