Description
In order to investigate the influence of m6A on RNA secondary-structure and RNA-protein interactions, we performed protein-interaction profile sequencing (PIP-seq) Overall design: 2 replicates per genotype of protein interaction profile sequencing (PIP-seq) in Arabidopsis thaliana ecotype Col-0 ABI3:MTA (mta) plants. Each rep is are crosslinked with formaldehyde split into structure-only and protein-bound libraries and further split to be treated by two different RNases (ssRNase and dsRNase).