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Accession IconSRP128058

Protein-interaction profile sequencing of 4 week old leaves in Arabidopsis ABI3:MTA plants.

Organism Icon Arabidopsis thaliana
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Technology Badge IconIllumina HiSeq 2000

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Description
In order to investigate the influence of m6A on RNA secondary-structure and RNA-protein interactions, we performed protein-interaction profile sequencing (PIP-seq) Overall design: 2 replicates per genotype of protein interaction profile sequencing (PIP-seq) in Arabidopsis thaliana ecotype Col-0 ABI3:MTA (mta) plants. Each rep is are crosslinked with formaldehyde split into structure-only and protein-bound libraries and further split to be treated by two different RNases (ssRNase and dsRNase).
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16
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