Transcriptome analysis of VMRC-LCD cells following ASCL1 knockdown

SRP127964

Homo sapiens

3 Downloadable Samples

Illumina HiSeq 4000

Submitter Supplied Information

Description

ASCL1 is a master transcription factor for neuroendocrine differentiation. RNA-sequencing analysis on VMRC-LCD cells following ASCL1 knockdown revealed a subset of genes possibly regulated by ASCL1. Overall design: VMRC-LCD cells were transfected with siRNAs for ASCL1, and RNA-sequencing was performed using Illumina HiSeq.

PubMed ID

30121393

Publication Title

An Integrative Analysis of Transcriptome and Epigenome Features of ASCL1-Positive Lung Adenocarcinomas.

Total Samples

Submitter’s Institution

No associated institution

Authors

Miyashita N, Horie M, Suzuki HI, Yoshihara M, Djureinovic D, Persson J, Brunnström H, Lindskog C, Elfving H, Micke P, Saito A, Nagase T

Source Repository

Sequence Read Archive (SRA)

Alternate Accession IDs

GSE108705

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