github link
Accession IconSRP102513

Transcriptome analysis on wild type and ddx39a mutant zebrafish embryos by Next Generation Sequencing

Organism Icon Danio rerio
Sample Icon No Downloadable Samples
Technology Badge IconIllumina HiSeq 4000

Submitter Supplied Information

Description
DEAD box RNA helicase DDX39A has been shown to regulate RNA metabolism; however its role in vertebrate development has not previously been examined. To determine the impact of loss of ddx39a on transcriptome during vertebrate early development, we pursued transcriptome analysis (RNA-Seq) on wild type and ddx39a mutant zebrafish embryos at 24 hour-post-fertilization. And by using RIP-seq to identify targeted RNA which were DDX39A binded. Overall design: Using RNA-seq to identify the changes in the transcriptomic landscape in ddx39a mutants. Using RIP-seq to identify DDX39A binding RNAs.
PubMed ID
No associated PubMed ID
Publication Title
No associated publication
Total Samples
2
Submitter’s Institution
No associated institution
Authors
No associated authors
Alternate Accession IDs

Samples

Show of 0 Total Samples
Filter
Add/Remove
Accession Code
Title
Processing Information
Additional Metadata
No rows found
Loading...