Assessing the impact of loss of ATF7IP and SETDB1 on the transcriptome

SRP089680

Homo sapiens

9 Downloadable Samples

Illumina HiSeq 2500

Submitter Supplied Information

Description

By comparing HeLa cells lacking ATF7IP or SETDB1 generated through CRISPR/Cas9-mediated gene disruption to wild-type HeLa cells, the goal of the experiment was to determine the effect of loss of the SETDB1â€¢ATF7IP complex on the transcriptome. Overall design: Total RNA-seq of three independent knockout HeLa clones lacking either ATF7IP or SETDB1

PubMed ID

27732843

Publication Title

ATF7IP-Mediated Stabilization of the Histone Methyltransferase SETDB1 Is Essential for Heterochromatin Formation by the HUSH Complex.

Total Samples

Submitter’s Institution

No associated institution

Authors

Timms RT, Tchasovnikarova IA, Antrobus R, Dougan G, Lehner PJ

Source Repository

Sequence Read Archive (SRA)

Alternate Accession IDs

GSE86813

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