Global transcript structure resolution of high gene density genomes through multi-platform data integration: deepCAGE

SRP071930

Homo sapiens

4 Downloadable Samples

Illumina HiSeq 2500

Submitter Supplied Information

Description

deepCAGE was used in conjunction with Pacific Biosciences Iso-Seq and Illumina RNA-Seq to globally resolve transcript structures in replicating Epstein-Barr virus. Overall design: deepCAGE of replicating Epstein-Barr virus in Akata cells to identify transcript 5'' ends

PubMed ID

27407110

Publication Title

Global transcript structure resolution of high gene density genomes through multi-platform data integration.

Total Samples

Submitter’s Institution

No associated institution

Authors

O'Grady T, Wang X, Höner Zu Bentrup K, Baddoo M, Concha M, Flemington EK

Source Repository

Sequence Read Archive (SRA)

Alternate Accession IDs

GSE79293

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