Transcriptional changes in dormant potato minitubers treated with 1-(alpha-ethylbenzy)-3-nitroquanidine

SRP047517

Solanum tuberosum

No Downloadable Samples

Illumina Genome Analyzer II

Submitter Supplied Information

Description

RNA was sequenced from commercially grown greenhouse minitubers treated with 10 ug of 1-(alpha-ethylbenzy)-3-nitroquanidine (NG) in DMSO and followed for four, and seven days post treatment. Control tubers were injected with DMSO alone. Sequence reads were mapped to the potato genome (PGSC_DM_v3_2.1.11) and transcript abundance was determined using Cuffdiff v 2.02. Overall design: Minitubers were injected with DMSO (control) or 10 ug of NG and then trancript changes were examined at on, four, and seven days after exposure.

PubMed ID

25270889

Publication Title

Treatment of potato tubers with the synthetic cytokinin 1-(α-ethylbenzyl)-3-nitroguanidine results in rapid termination of endodormancy and induction of transcripts associated with cell proliferation and growth.

Total Samples

Submitter’s Institution

No associated institution

Authors

Campbell M, Suttle J, Douches DS, Buell CR

Source Repository

Sequence Read Archive (SRA)

Alternate Accession IDs

GSE61796

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