PAR-CLIP-seq reveals RNAs directly interacting with CTCF in human transformed cell line U2OS

SRP034666

Homo sapiens

3 Downloadable Samples

Illumina HiSeq 2000

Submitter Supplied Information

Description

This experiment sought to determine the genome-wide interactome of CTCF in human cells. Overall design: PAR-CLIP seq for CTCF was performed in U2OS cells in 2 biological replicates

PubMed ID

24696455

Publication Title

CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53.

Total Samples

Submitter’s Institution

No associated institution

Authors

Saldaña-Meyer R, González-Buendía E, Guerrero G, Narendra V, Bonasio R, Recillas-Targa F, Reinberg D

Source Repository

Sequence Read Archive (SRA)

Alternate Accession IDs

GSE53554

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