Genome wide mapping of effects of U6atac knockdown on pre-mRNA splicing

SRP026297

Homo sapiens

2 Downloadable Samples

Illumina HiSeq 2000

Submitter Supplied Information

Description

This project looks into experimentally identifying all minor introns by knocking down the minor spliceosome''s catalytic snRNP, U6atac. Overall design: Knockdown of U6atac by antisense morpholino followed by examining mRNA splicing by RNA-seq

PubMed ID

23908766

Publication Title

Minor introns are embedded molecular switches regulated by highly unstable U6atac snRNA.

Total Samples

Submitter’s Institution

No associated institution

Authors

Younis I, Dittmar K, Wang W, Foley SW, Berg MG, Hu KY, Wei Z, Wan L, Dreyfuss G

Source Repository

Sequence Read Archive (SRA)

Alternate Accession IDs

GSE48263

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