smRNAs in wildtype and RDR6-15 knockout Arabidopsis thaliana Col-0 leaf

This set consists of small RNAs sequenced from two replicates of wildtype and two replicates of RDR6-15 knockout Arabidopsis thaliana Col-0 leaf samples. RDR6 is required for the production of tasRNAs (trans-acting small RNAS) and so tags associated with the tasRNA loci should be severely down-regulated or absent in the knockout compared to wildtype. The set can thus be used as containing known true positives for testing differential expression detection methods. Overall design: Examination of smRNA in 2 replicates wildtype and 2 replicates RDR6-15 knockout

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Hardcastle TJ, Kelly KA