Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours [Affymetrix]

GSE84784

Homo sapiens

18 Downloadable Samples

Affymetrix Human Transcriptome Array 2.0 (hta20)

Submitter Supplied Information

Description

Here we compared the performance of Affymetrix HTA 2.0 microarray and Illumina 2000 RNA-sequencing techniques on the clinical samples collected from patients with lung squamous cell carcinoma.

PubMed ID

28587590

Publication Title

RNA sequencing and transcriptome arrays analyses show opposing results for alternative splicing in patient derived samples.

Total Samples

Submitter’s Institution

LIH

Authors

Nazarov PV, Muller A, Kaoma T, Nicot N, Maximo C, Birembaut P, Tran NL, Dittmar G, Vallar L

Source Repository

Gene Expression Omnibus (GEO)

Alternate Accession IDs

E-GEOD-84784

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