Gene expression profiling of FFPE breast cancer samples

GSE38554

Homo sapiens

44 Downloadable Samples

Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Submitter Supplied Information

Description

We implemented an optimized processing, using alternative Chip Description Files (CDFs) and fRMA normalization, which improve the quality of downstream analysis.

PubMed ID

24489733

Publication Title

Accurate data processing improves the reliability of Affymetrix gene expression profiles from FFPE samples.

Total Samples

Submitter’s Institution

Fondazione IRCCS Istituto Nazionale dei Tumori

Authors

Callari M, Lembo A, Bianchini G, Musella V, Cappelletti V, Gianni L, Daidone MG, Provero P

Source Repository

Gene Expression Omnibus (GEO)

Alternate Accession IDs

E-GEOD-38554

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