Exposure of Barrett's associated adenocarcinoma cell lines SKGT4 to deoxycholic acid (DCA)

GSE13376

Homo sapiens

15 Downloadable Samples

Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Submitter Supplied Information

Description

The involvment of bile acids such as deoxycholic acid (DCA) in gastro-esophageal reflux disease and subsequent Barretts metaplsia has been postulated. This study examines gene expression induced by exposure to DCA in esophageal cells and may be utilised in cross-comparisons with data derived from gene expression studies of Barretts esophagus and associated adenocarcinoma.

PubMed ID

20139130

Publication Title

An integrative genomic approach in oesophageal cells identifies TRB3 as a bile acid responsive gene, downregulated in Barrett's oesophagus, which regulates NF-kappaB activation and cytokine levels.

Total Samples

Submitter’s Institution

Institute of Molecular Medicine

Authors

Duggan SP, Behan FM, Kirca M, Smith S, Reynolds JV, Long A, Kelleher D

Source Repository

Gene Expression Omnibus (GEO)

Alternate Accession IDs

E-GEOD-13376

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